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PseudoCAP Proteins with links to NCBI
NCBI Conserved Domain Database predictions
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- Tracks
- DNA
   
DNA sequence (at high resolution <= 130 bp)/Percent GC Content (at low resolution > 130 bp) [?] Inverted Repeats (palindromes) [?] Rho-independent transcription terminator predictions (TransTermHP) [?]
DNASU Plasmid Repository Pseudomonas aeruginosa PAO1 ORF collection (pDONR201 vector) [?] PseudoCAP Genes [?] 
- Operons
   
Computationally Predicted Operons from the Database of Prokaryotic Operons (DOOR)   
- Orthologs
   
Predicted orthologs (Reciprocal Best Blast Analysis /Ortholuge) [?]  
- Protein
   
NCBI Conserved Domain Database predictions [?] PseudoCAP Proteins with links to NCBI [?] Subcellular localization [?]
- RNA
   
Non-coding RNA [?]  
- RNA-Seq
-  PAO1 in LB medium, 37°C
   
5' monophosphate cleavage site predictions on forward strand (log10-fold step increase) 5' triphosphate TSS predictions on forward strand (log10-fold step increase) RNA-Seq first base pair coverage - LB Medium, 37°C (100bp window)
5' monophosphate cleavage site predictions on reverse strand (log10-fold step increase) 5' triphosphate TSS predictions on reverse strand (log10-fold step increase)  
- SNPs
   
SNPs in strain Pseudomonas aeruginosa 2192 [?] SNPs in strain Pseudomonas aeruginosa LESB58 [?] SNPs in strain Pseudomonas aeruginosa PAO1 (Sept, 2000) [?]
SNPs in strain Pseudomonas aeruginosa 39016 [?] SNPs in strain Pseudomonas aeruginosa PA7 [?] SNPs in strain Pseudomonas aeruginosa UCBPP-PA14 [?]
SNPs in strain Pseudomonas aeruginosa C3719 [?] SNPs in strain Pseudomonas aeruginosa PACS2 [?] 
- Transposon Mutant Libraries
   
PA Two Allele Transposon Library [?] TN5 lux Transposon Library(UBC) [?] 
- Analysis
   
3-frame translation (forward) [?] 3-frame translation (reverse) [?] Restriction Sites

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